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Biology 353: Comparative animal physiology
Fall 2007: Course Research Guide

David Schmitt

Natural Sciences Librarian

dschmitt@csusm.edu

750-4342

This guide supports students' research when completing the required lab write-ups.

The focus of this guide is on understanding how to produce a literature review/introduction section of a lab write-up. Assistance with searching recommended databases is also provided.

Contact Yvonne Nalani Meulemans with any questions.
 

Research literature terminology
Databases and searching
Search strategies and links to databases
Citing information
Example lit review/introduction

Second Example
 

 

Research literature terminology
Confirm you have an accurate understanding of the various terms used to describe scientific publishing and research.

Terminology review

Journal
(or 'scholarly journal' or 'academic journal' or  'professional journal')

The main mode of communication by professionals in a field; this regular publication provides the venue where researches share research, perspectives, and other scholarly communication. 

Published every week, month, or every few months like a normal magazine.
 
Electronic journal
A journal that happens to be 'published' online. There is no difference between a journal that is published in print (like a normal magazine) and a journal that is published online.
 
Peer-review
The process by which original research submitted for publication in a journal is reviewed by other experts (peers) in a particular field. Research is checked by these other experts for data quality, methodology, and if the research is a unique contribution to knowledge in a particular field.
 
Peer-reviewed journal article
A journal article that has undergone peer-review.
.
 
Primary literature
(or 'professional literature' or 'research literature')

Another way to describe journal articles that provide the actual data collected, how it was collected, and data analysis.
 
Research article
(or 'empirical study')

Another way to describe journal articles that provide the actual data collected, how it was collected, and data analysis.
 
Literature review
(or  'reviews' or 'introduction' or 'background')

Either an entire article or part of an article that discusses what is already know on the topic being discussed, and what is not known.

When it is part of a research article, the literature review will also discuss how the research that is to be discussed helps to provide further knowledge on the subject.

Articles that are entirely literature reviews are especially useful when you don't know much about an topic, because they summarize what is known and not known.
 


 

Databases and searching
Below are strategies and links to journal article databases.


Chunking your search

AND

OR

NOT

"proteasome*"
and
"protein inhibitor*"

"ghrelin" or "leptin"

"ghrelin" not "leptin"

  • gets results with both terms
  • gets results on either or both terms
  • gets results on ghrelin, but nothing about leptin


-an * at the word roots retrieves plurals/variations:
sex* = sexual, sexes, sexism, etc.


Search examples

Example topic

Sample search

I need articles on how Weddell seals can dive as deep as they do.
 

Leptonychotes weddellii
and
(div*)
 

I need to articles on how ghrelin affects appetite in humans.

"ghrelin"
and
appetite*
and ( human* or "homo sapien")
 

-an * at the word roots retrieves plurals/variations:
sex* = sexual, sexes, sexism, etc.
 

Article databases

Students are expected to rely heavily on the databases below to find the journal articles required to complete their lab write-up literature reviews/introductions.

Recommend Databases
 
Biological Abstracts (BIOSIS)
A complete collection of bibliographic references covering life science and biomedical research literature published from more than 4,000 journals internationally. BioOne is collection of about 100 journals in the biosciences and is searchable via Biological Abstracts.
 
PubMed @ CSUSM
The primary database of world biomedical literature.

 
Scirus
A science-focused search engine that also searches for journal articles. Links to our library's collection when accessed via the campus network. Does not link to our library's collections when accessed outside of the campus network.

 
GoogleScholar
Search the research literature using Google. Does not link to our library's collections when accessed outside of the campus network.

 

 

Citing information
When using the primary literature, there is a standard protocol for citing information in the literature review/introduction as well as your reference list.

For the in-class assignment, we will be using the style required by the American Physiological Society, found here:

APS Style Guide

The Council of Science Editors produces a guide to appropriate scientific style.

If you need some quick help, the following are web sites on CSE citation style: